Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 DPM2-202ENST00000373110 738 ntTSL 2 BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 AL138918.1-201ENST00000568306 659 ntBASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 MIR4453-201ENST00000584019 89 ntBASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
RPAP1Q9BWH6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 AC100757.3-201ENST00000622361 1406 ntBASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RPAP1Q9BWH6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 ABR-203ENST00000536794 2213 ntTSL 2 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 FOXO1B-201ENST00000504678 1527 ntBASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 AC018529.1-201ENST00000613063 361 ntBASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 HCG11-201ENST00000411553 5696 ntBASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.79■□□□□ 0.76
RPAP1Q9BWH6 AC022188.1-201ENST00000620960 1664 ntBASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 GAPDHP21-201ENST00000450301 1010 ntBASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RPAP1Q9BWH6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms