Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 WASH6P-202ENST00000359512 1437 ntBASIC11.46□□□□□ -0.57
UPK3BQ9BT76 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 TFAMP1-201ENST00000412727 736 ntBASIC11.46□□□□□ -0.57
UPK3BQ9BT76 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 AC022145.2-201ENST00000598203 171 ntBASIC11.46□□□□□ -0.57
UPK3BQ9BT76 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UPK3BQ9BT76 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC11.46□□□□□ -0.58
UPK3BQ9BT76 LINC00895-201ENST00000629028 1637 ntBASIC11.46□□□□□ -0.58
UPK3BQ9BT76 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.45□□□□□ -0.58
UPK3BQ9BT76 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC11.45□□□□□ -0.58
UPK3BQ9BT76 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 GGCT-205ENST00000409436 954 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 PMS2P2-201ENST00000425039 1128 ntBASIC11.45□□□□□ -0.58
UPK3BQ9BT76 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC11.45□□□□□ -0.58
UPK3BQ9BT76 TIMM8BP1-201ENST00000452384 211 ntBASIC11.45□□□□□ -0.58
UPK3BQ9BT76 AC023141.5-201ENST00000458585 616 ntBASIC11.45□□□□□ -0.58
UPK3BQ9BT76 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms