Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 AC092474.2-201ENST00000424288 719 ntBASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 FAM197Y3-203ENST00000618346 717 ntBASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 AC025580.3-201ENST00000617932 1424 ntBASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HERPUD2Q9BSE4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 MED15P5-201ENST00000423150 992 ntBASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 AL078644.1-201ENST00000609881 752 ntBASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 PPT1-215ENST00000641471 2368 ntBASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HERPUD2Q9BSE4 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 AC004877.2-201ENST00000623941 599 ntBASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 PMS2P7-201ENST00000506558 1336 ntBASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 AC073439.1-201ENST00000624121 1774 ntBASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HERPUD2Q9BSE4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms