Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 TTTY23B-201ENST00000442790 549 ntBASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CDK5RAP2Q96SN8 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.96■□□□□ 0.62
CDK5RAP2Q96SN8 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 CR383656.12-201ENST00000549567 513 ntBASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 AC010319.3-201ENST00000597028 470 ntBASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CDK5RAP2Q96SN8 MIR648-201ENST00000385046 94 ntBASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AC007389.4-201ENST00000454674 793 ntBASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AL049840.4-201ENST00000602422 811 ntBASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 NME2P1-201ENST00000426182 414 ntBASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 PHKG1P2-201ENST00000457537 863 ntBASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 NOP2-220ENST00000545915 630 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 RARRES2P5-201ENST00000564013 466 ntBASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 APOC4-201ENST00000591600 348 ntTSL 3 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AL450472.2-201ENST00000603663 1156 ntBASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AC097359.3-201ENST00000603982 1210 ntBASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.94■□□□□ 0.62
CDK5RAP2Q96SN8 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 HAUS4P1-201ENST00000406739 1145 ntBASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 MIR1909-201ENST00000411312 80 ntBASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 AC093726.1-201ENST00000608064 963 ntBASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CDK5RAP2Q96SN8 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms