Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 AL021920.2-201ENST00000624828 1351 ntBASIC15.48■□□□□ 0.07
NR1H4Q96RI1 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
NR1H4Q96RI1 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 SBF1P1-201ENST00000444527 5631 ntBASIC15.47■□□□□ 0.07
NR1H4Q96RI1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 KRT17P2-201ENST00000300992 1314 ntBASIC15.47■□□□□ 0.07
NR1H4Q96RI1 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 HES2-202ENST00000377836 507 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 PVRIG2P-201ENST00000435460 978 ntBASIC15.47■□□□□ 0.07
NR1H4Q96RI1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 AC007663.1-201ENST00000438948 1240 ntBASIC15.47■□□□□ 0.07
NR1H4Q96RI1 POU5F1P6-201ENST00000466990 990 ntBASIC15.47■□□□□ 0.07
NR1H4Q96RI1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 AC092338.2-201ENST00000568827 1415 ntBASIC15.47■□□□□ 0.07
NR1H4Q96RI1 AC109462.3-201ENST00000573934 613 ntBASIC15.47■□□□□ 0.07
NR1H4Q96RI1 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.47■□□□□ 0.07
NR1H4Q96RI1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 AC079781.5-202ENST00000641784 3743 ntBASIC15.46■□□□□ 0.07
NR1H4Q96RI1 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 AC009090.5-201ENST00000624886 2285 ntBASIC15.46■□□□□ 0.07
NR1H4Q96RI1 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 AL355075.4-201ENST00000554988 638 ntBASIC15.46■□□□□ 0.07
NR1H4Q96RI1 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 BEND3P1-201ENST00000421591 1944 ntBASIC15.46■□□□□ 0.07
NR1H4Q96RI1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
NR1H4Q96RI1 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
NR1H4Q96RI1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
NR1H4Q96RI1 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H4Q96RI1 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H4Q96RI1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H4Q96RI1 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H4Q96RI1 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
NR1H4Q96RI1 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
NR1H4Q96RI1 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms