Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 AL353779.1-201ENST00000434793 351 ntBASIC18.96■□□□□ 0.63
CCDC17Q96LX7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 AC005225.4-201ENST00000557330 545 ntBASIC18.96■□□□□ 0.63
CCDC17Q96LX7 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCDC17Q96LX7 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 FLJ38576-201ENST00000623820 2459 ntBASIC18.95■□□□□ 0.62
CCDC17Q96LX7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 REXO1L8P-201ENST00000604378 1897 ntBASIC18.95■□□□□ 0.62
CCDC17Q96LX7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 HIST3H2BA-201ENST00000436555 524 ntBASIC18.95■□□□□ 0.62
CCDC17Q96LX7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.95■□□□□ 0.62
CCDC17Q96LX7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.95■□□□□ 0.62
CCDC17Q96LX7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 AGGF1P2-201ENST00000426656 2106 ntBASIC18.94■□□□□ 0.62
CCDC17Q96LX7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 AC243562.2-201ENST00000561247 970 ntBASIC18.94■□□□□ 0.62
CCDC17Q96LX7 AC104794.3-201ENST00000566840 1248 ntBASIC18.94■□□□□ 0.62
CCDC17Q96LX7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 AC239800.4-201ENST00000603712 296 ntBASIC18.94■□□□□ 0.62
CCDC17Q96LX7 AC025048.6-201ENST00000634326 1161 ntBASIC18.94■□□□□ 0.62
CCDC17Q96LX7 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC17Q96LX7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC17Q96LX7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms