Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
IFT43Q96FT9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
IFT43Q96FT9 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
IFT43Q96FT9 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
IFT43Q96FT9 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.93■□□□□ 0.3
IFT43Q96FT9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.93■□□□□ 0.3
IFT43Q96FT9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 AL596442.2-201ENST00000610240 980 ntBASIC16.93■□□□□ 0.3
IFT43Q96FT9 AL645728.2-201ENST00000641974 660 ntBASIC16.93■□□□□ 0.3
IFT43Q96FT9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 AC025580.3-201ENST00000617932 1424 ntBASIC16.93■□□□□ 0.3
IFT43Q96FT9 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.93■□□□□ 0.3
IFT43Q96FT9 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IFT43Q96FT9 KRT18P28-201ENST00000453838 1332 ntBASIC16.93■□□□□ 0.3
IFT43Q96FT9 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.93■□□□□ 0.3
IFT43Q96FT9 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.93■□□□□ 0.3
IFT43Q96FT9 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 AL671710.1-201ENST00000610245 2349 ntBASIC16.92■□□□□ 0.3
IFT43Q96FT9 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 CNN2P11-201ENST00000429351 262 ntBASIC16.92■□□□□ 0.3
IFT43Q96FT9 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 CEND1P1-201ENST00000451006 455 ntBASIC16.92■□□□□ 0.3
IFT43Q96FT9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 AL031432.2-201ENST00000566714 459 ntBASIC16.92■□□□□ 0.3
IFT43Q96FT9 AL928711.1-201ENST00000570165 459 ntBASIC16.92■□□□□ 0.3
IFT43Q96FT9 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 AL078644.1-201ENST00000609881 752 ntBASIC16.92■□□□□ 0.3
IFT43Q96FT9 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 KRT8P39-201ENST00000396270 1433 ntBASIC16.92■□□□□ 0.3
IFT43Q96FT9 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
IFT43Q96FT9 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
IFT43Q96FT9 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 LINC02228-204ENST00000642115 2962 ntBASIC16.91■□□□□ 0.3
IFT43Q96FT9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 AC027796.2-201ENST00000575326 344 ntBASIC16.91■□□□□ 0.3
IFT43Q96FT9 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
IFT43Q96FT9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.91■□□□□ 0.3
IFT43Q96FT9 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms