Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 BCAR1-209ENST00000546196 1340 ntBASIC14.38□□□□□ -0.11
SPTSSAQ969W0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.38□□□□□ -0.11
SPTSSAQ969W0 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 ZNF259P1-201ENST00000407656 1365 ntBASIC14.37□□□□□ -0.11
SPTSSAQ969W0 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 RPL13AP23-201ENST00000480739 586 ntBASIC14.37□□□□□ -0.11
SPTSSAQ969W0 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 AL009183.1-201ENST00000603760 355 ntBASIC14.37□□□□□ -0.11
SPTSSAQ969W0 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 MED16-214ENST00000617672 554 ntTSL 5 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 PCDHA1-201ENST00000378133 2726 ntBASIC14.37□□□□□ -0.11
SPTSSAQ969W0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SPTSSAQ969W0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.37□□□□□ -0.11
SPTSSAQ969W0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 AC034105.1-201ENST00000563488 319 ntBASIC14.36□□□□□ -0.11
SPTSSAQ969W0 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 AC004877.2-201ENST00000623941 599 ntBASIC14.36□□□□□ -0.11
SPTSSAQ969W0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.36□□□□□ -0.11
SPTSSAQ969W0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 AC025580.3-201ENST00000617932 1424 ntBASIC14.35□□□□□ -0.11
SPTSSAQ969W0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SPTSSAQ969W0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms