Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC14.04□□□□□ -0.16
USP9XQ93008 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.04□□□□□ -0.16
USP9XQ93008 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.04□□□□□ -0.16
USP9XQ93008 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
USP9XQ93008 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.04□□□□□ -0.16
USP9XQ93008 AL627389.1-201ENST00000413508 1182 ntBASIC14.04□□□□□ -0.16
USP9XQ93008 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC14.04□□□□□ -0.16
USP9XQ93008 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC14.04□□□□□ -0.16
USP9XQ93008 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.04□□□□□ -0.16
USP9XQ93008 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.04□□□□□ -0.16
USP9XQ93008 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.04□□□□□ -0.16
USP9XQ93008 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.04□□□□□ -0.16
USP9XQ93008 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC14.04□□□□□ -0.16
USP9XQ93008 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
USP9XQ93008 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 ABALON-201ENST00000629058 1903 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 AC098818.2-201ENST00000564925 2320 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 AL512430.1-201ENST00000392575 860 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.03□□□□□ -0.16
USP9XQ93008 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.03□□□□□ -0.16
USP9XQ93008 AC005357.2-202ENST00000590507 1060 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC14.03□□□□□ -0.16
USP9XQ93008 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
USP9XQ93008 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.03□□□□□ -0.16
USP9XQ93008 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
USP9XQ93008 AC087289.5-201ENST00000586076 3175 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.03□□□□□ -0.16
USP9XQ93008 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.03□□□□□ -0.16
USP9XQ93008 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.03□□□□□ -0.16
USP9XQ93008 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
USP9XQ93008 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
USP9XQ93008 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 C2orf27AP3-201ENST00000434123 579 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.03□□□□□ -0.16
USP9XQ93008 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.03□□□□□ -0.16
USP9XQ93008 MIR4750-201ENST00000584564 56 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
USP9XQ93008 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.03□□□□□ -0.16
USP9XQ93008 AL354718.3-201ENST00000616414 581 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 CR382287.1-201ENST00000623954 586 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
USP9XQ93008 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.03□□□□□ -0.16
USP9XQ93008 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC14.03□□□□□ -0.16
USP9XQ93008 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.03□□□□□ -0.16
USP9XQ93008 CYP4F24P-201ENST00000586049 1580 ntBASIC14.03□□□□□ -0.16
USP9XQ93008 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
USP9XQ93008 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
USP9XQ93008 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
USP9XQ93008 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
USP9XQ93008 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
USP9XQ93008 AC134698.3-201ENST00000523880 214 ntBASIC14.02□□□□□ -0.16
USP9XQ93008 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
USP9XQ93008 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
USP9XQ93008 RN7SL555P-201ENST00000584742 339 ntBASIC14.02□□□□□ -0.16
USP9XQ93008 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.02□□□□□ -0.16
USP9XQ93008 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms