Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP6NLQ92738 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.39■□□□□ 0.54
USP6NLQ92738 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6NLQ92738 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
USP6NLQ92738 BOLA2P3-201ENST00000404566 256 ntBASIC18.39■□□□□ 0.53
USP6NLQ92738 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC18.39■□□□□ 0.53
USP6NLQ92738 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.39■□□□□ 0.53
USP6NLQ92738 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.39■□□□□ 0.53
USP6NLQ92738 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.39■□□□□ 0.53
USP6NLQ92738 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.39■□□□□ 0.53
USP6NLQ92738 AC010319.3-201ENST00000597028 470 ntBASIC18.39■□□□□ 0.53
USP6NLQ92738 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.39■□□□□ 0.53
USP6NLQ92738 GGT4P-201ENST00000623672 1708 ntBASIC18.39■□□□□ 0.53
USP6NLQ92738 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
USP6NLQ92738 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP6NLQ92738 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
USP6NLQ92738 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
USP6NLQ92738 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC18.38■□□□□ 0.53
USP6NLQ92738 RPF1-202ENST00000370656 724 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.38■□□□□ 0.53
USP6NLQ92738 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.38■□□□□ 0.53
USP6NLQ92738 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.38■□□□□ 0.53
USP6NLQ92738 AC104989.1-201ENST00000519711 778 ntBASIC18.38■□□□□ 0.53
USP6NLQ92738 TIMM17BP1-201ENST00000545713 516 ntBASIC18.38■□□□□ 0.53
USP6NLQ92738 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC18.38■□□□□ 0.53
USP6NLQ92738 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
USP6NLQ92738 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.38■□□□□ 0.53
USP6NLQ92738 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 AL645608.8-201ENST00000606034 2086 ntBASIC18.38■□□□□ 0.53
USP6NLQ92738 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.38■□□□□ 0.53
USP6NLQ92738 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 CLK3P2-201ENST00000427566 1453 ntBASIC18.38■□□□□ 0.53
USP6NLQ92738 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 PP12613-201ENST00000424958 2230 ntBASIC18.38■□□□□ 0.53
USP6NLQ92738 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC18.38■□□□□ 0.53
USP6NLQ92738 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP6NLQ92738 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
USP6NLQ92738 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP6NLQ92738 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
USP6NLQ92738 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
USP6NLQ92738 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
USP6NLQ92738 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
USP6NLQ92738 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6NLQ92738 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
USP6NLQ92738 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP6NLQ92738 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP6NLQ92738 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP6NLQ92738 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.37■□□□□ 0.53
USP6NLQ92738 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
USP6NLQ92738 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
USP6NLQ92738 AP002490.2-201ENST00000524791 560 ntBASIC18.37■□□□□ 0.53
USP6NLQ92738 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.37■□□□□ 0.53
USP6NLQ92738 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
USP6NLQ92738 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.37■□□□□ 0.53
USP6NLQ92738 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.37■□□□□ 0.53
USP6NLQ92738 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP6NLQ92738 AL136982.4-201ENST00000437689 1740 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms