Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 AC134684.3-201ENST00000641758 218 ntBASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 CICP6-201ENST00000457191 2729 ntBASIC18.87■□□□□ 0.61
CCDC148Q8NFR7 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 AC004461.1-201ENST00000412461 403 ntBASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 AC069335.1-201ENST00000489972 472 ntBASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 LINC01225-203ENST00000563550 1244 ntBASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 AP000842.3-202ENST00000569238 1080 ntBASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 AC004835.2-201ENST00000603762 682 ntBASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 FHL2-212ENST00000607522 759 ntTSL 2 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CCDC148Q8NFR7 DOC2GP-204ENST00000639052 2548 ntBASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 PKD1P5-201ENST00000532415 10291 ntBASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 AC142381.1-201ENST00000426099 345 ntBASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 AC055717.3-201ENST00000622967 595 ntBASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CCDC148Q8NFR7 MTHFR-217ENST00000641820 1569 ntBASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms