Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 AL031731.1-201ENST00000642131 2094 ntBASIC14.34□□□□□ -0.11
CSNK2A3Q8NEV1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK2A3Q8NEV1 AL671710.1-201ENST00000610245 2349 ntBASIC14.33□□□□□ -0.11
CSNK2A3Q8NEV1 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.33□□□□□ -0.11
CSNK2A3Q8NEV1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK2A3Q8NEV1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
CSNK2A3Q8NEV1 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 MRPL3P1-201ENST00000400109 1033 ntBASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 VN2R19P-201ENST00000442399 1052 ntBASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 UNC93B6-202ENST00000528242 690 ntBASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 SLC25A6P4-201ENST00000586535 553 ntBASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 AL049840.3-201ENST00000602669 611 ntBASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 AC105917.1-201ENST00000506637 2539 ntBASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC14.33□□□□□ -0.12
CSNK2A3Q8NEV1 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 AL031432.2-201ENST00000566714 459 ntBASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 AL928711.1-201ENST00000570165 459 ntBASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 ACTL9-202ENST00000612068 1252 ntBASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 LINC00554-201ENST00000564841 3011 ntBASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CSNK2A3Q8NEV1 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms