Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.57■□□□□ 0.24
SYNPOQ8N3V7 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AC079776.1-201ENST00000401540 1152 ntBASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AP002490.2-201ENST00000524791 560 ntBASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 AC061975.2-201ENST00000581722 295 ntBASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SYNPOQ8N3V7 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 TPRX2P-201ENST00000535362 881 ntBASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 AL589702.1-201ENST00000641229 1509 ntBASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SYNPOQ8N3V7 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 SNX33P1-201ENST00000592116 1762 ntBASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SYNPOQ8N3V7 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms