Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 MTX1P1-201ENST00000440904 838 ntBASIC22.23■■□□□ 1.15
XRN1Q8IZH2 AL590640.2-201ENST00000457038 527 ntBASIC22.23■■□□□ 1.15
XRN1Q8IZH2 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
XRN1Q8IZH2 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 ZBTB45P2-201ENST00000452245 1531 ntBASIC22.22■■□□□ 1.15
XRN1Q8IZH2 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
XRN1Q8IZH2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 GRN-222ENST00000639447 1314 ntTSL 2 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 Z93015.1-201ENST00000451718 390 ntBASIC22.21■■□□□ 1.15
XRN1Q8IZH2 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 HNRNPA1P48-202ENST00000565308 961 ntBASIC22.21■■□□□ 1.15
XRN1Q8IZH2 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC22.21■■□□□ 1.15
XRN1Q8IZH2 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC22.21■■□□□ 1.15
XRN1Q8IZH2 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
XRN1Q8IZH2 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 POU5F1P6-201ENST00000466990 990 ntBASIC22.2■■□□□ 1.14
XRN1Q8IZH2 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 AC097359.3-201ENST00000603982 1210 ntBASIC22.2■■□□□ 1.14
XRN1Q8IZH2 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 TP73-209ENST00000603362 1668 ntTSL 5 BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 MIR663B-201ENST00000408361 115 ntBASIC22.2■■□□□ 1.14
XRN1Q8IZH2 AC104306.2-201ENST00000451877 341 ntBASIC22.2■■□□□ 1.14
XRN1Q8IZH2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
XRN1Q8IZH2 AC078819.1-201ENST00000547454 765 ntBASIC22.2■■□□□ 1.14
XRN1Q8IZH2 AC012085.1-201ENST00000548270 765 ntBASIC22.2■■□□□ 1.14
XRN1Q8IZH2 AC091271.1-201ENST00000611877 1162 ntBASIC22.2■■□□□ 1.14
XRN1Q8IZH2 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms