Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TMEFF1Q8IYR6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 TMEM14DP-201ENST00000422205 345 ntBASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 AL512343.1-201ENST00000605837 169 ntBASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 MIR6069-201ENST00000620069 79 ntBASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 AL391256.1-201ENST00000443260 1855 ntBASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TMEFF1Q8IYR6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 AL512652.2-201ENST00000625156 1716 ntBASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 SPDYE17-201ENST00000412399 783 ntBASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 AC098850.1-201ENST00000419919 790 ntBASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
TMEFF1Q8IYR6 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms