Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 AC096582.2-201ENST00000510860 516 ntBASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 AC091167.2-201ENST00000579581 588 ntBASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 MIR3180-1-201ENST00000580374 94 ntBASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 AP005901.3-202ENST00000581653 237 ntBASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 MIR3180-3-201ENST00000584616 94 ntBASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 Z69720.1-201ENST00000601483 472 ntBASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.41■□□□□ 0.22
TRIM42Q8IWZ5 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRIM42Q8IWZ5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
TRIM42Q8IWZ5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 AC079776.2-201ENST00000641154 1609 ntBASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 RCN1P2-201ENST00000398357 915 ntBASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TRIM42Q8IWZ5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms