Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 AL844908.2-201ENST00000609461 460 ntBASIC17.35■□□□□ 0.37
RNF135Q8IUD6 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 AL133338.1-201ENST00000565695 1517 ntBASIC17.35■□□□□ 0.37
RNF135Q8IUD6 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RNF135Q8IUD6 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 RNU1-129P-201ENST00000384064 167 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 AL391825.1-201ENST00000457671 1364 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 AC092552.1-201ENST00000547243 906 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 U1.21-201ENST00000580816 167 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 AC092068.3-201ENST00000587894 2016 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 AL031055.1-201ENST00000606362 631 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 AC016027.1-202ENST00000607927 1699 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 LINC02012-201ENST00000608206 1725 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 TEX28P1-201ENST00000613479 1221 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 TEX28P2-201ENST00000617764 1221 ntBASIC17.34■□□□□ 0.37
RNF135Q8IUD6 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
RNF135Q8IUD6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 AC060834.1-201ENST00000443027 2032 ntBASIC17.33■□□□□ 0.37
RNF135Q8IUD6 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 REXO1L6P-201ENST00000603433 1515 ntBASIC17.33■□□□□ 0.37
RNF135Q8IUD6 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.33■□□□□ 0.37
RNF135Q8IUD6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 AC142381.1-201ENST00000426099 345 ntBASIC17.33■□□□□ 0.36
RNF135Q8IUD6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms