Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 AC105917.1-201ENST00000506637 2539 ntBASIC15.17■□□□□ 0.02
VRK2Q86Y07 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 AC104109.2-201ENST00000602919 1418 ntBASIC15.17■□□□□ 0.02
VRK2Q86Y07 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
VRK2Q86Y07 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
VRK2Q86Y07 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 AC079776.4-201ENST00000511039 504 ntBASIC15.16■□□□□ 0.02
VRK2Q86Y07 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 AC018845.2-201ENST00000568326 409 ntBASIC15.16■□□□□ 0.02
VRK2Q86Y07 AL009183.1-201ENST00000603760 355 ntBASIC15.16■□□□□ 0.02
VRK2Q86Y07 AC023141.13-201ENST00000604991 943 ntBASIC15.16■□□□□ 0.02
VRK2Q86Y07 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 CDC14C-201ENST00000428251 1719 ntBASIC15.16■□□□□ 0.02
VRK2Q86Y07 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
VRK2Q86Y07 LINC02447-202ENST00000501888 2146 ntBASIC15.16■□□□□ 0.02
VRK2Q86Y07 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
VRK2Q86Y07 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 AC034105.1-201ENST00000563488 319 ntBASIC15.15■□□□□ 0.02
VRK2Q86Y07 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 AC007064.4-201ENST00000637740 555 ntBASIC15.15■□□□□ 0.02
VRK2Q86Y07 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 AC025580.3-201ENST00000617932 1424 ntBASIC15.15■□□□□ 0.02
VRK2Q86Y07 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
VRK2Q86Y07 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.15■□□□□ 0.02
VRK2Q86Y07 BCAR1-209ENST00000546196 1340 ntBASIC15.15■□□□□ 0.02
VRK2Q86Y07 U82695.1-201ENST00000635752 1889 ntBASIC15.14■□□□□ 0.01
VRK2Q86Y07 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.14■□□□□ 0.01
VRK2Q86Y07 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
VRK2Q86Y07 AC011270.2-201ENST00000624293 2550 ntBASIC15.14■□□□□ 0.01
VRK2Q86Y07 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms