Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LYSMD3Q7Z3D4 AC026691.1-201ENST00000602502 2017 ntBASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 POU5F1P6-201ENST00000466990 990 ntBASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AC069335.1-201ENST00000489972 472 ntBASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 LINC01225-203ENST00000563550 1244 ntBASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AL596442.2-201ENST00000610240 980 ntBASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LYSMD3Q7Z3D4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LYSMD3Q7Z3D4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.46■□□□□ 0.22
LYSMD3Q7Z3D4 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 AP000344.2-201ENST00000512987 629 ntBASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 IGHV3-62-201ENST00000520057 340 ntBASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LYSMD3Q7Z3D4 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms