Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 RN7SL510P-201ENST00000581311 263 ntBASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 AL121912.1-201ENST00000603683 238 ntBASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
TMEM53Q6P2H8 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 AC060834.1-201ENST00000443027 2032 ntBASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 TPM4P1-201ENST00000436100 807 ntBASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 SART3-203ENST00000546611 1184 ntBASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 MTDHP4-201ENST00000600287 670 ntBASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 AC005840.4-201ENST00000541242 2494 ntBASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TMEM53Q6P2H8 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 AC068587.6-202ENST00000641839 5619 ntBASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TMEM53Q6P2H8 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms