Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RTL6Q6ICC9 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTL6Q6ICC9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTL6Q6ICC9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RTL6Q6ICC9 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RTL6Q6ICC9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 AC092068.3-201ENST00000587894 2016 ntBASIC14.78□□□□□ -0.04
RTL6Q6ICC9 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 AC006277.1-201ENST00000624348 1610 ntBASIC14.78□□□□□ -0.04
RTL6Q6ICC9 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 AC236430.1-201ENST00000402231 743 ntBASIC14.78□□□□□ -0.04
RTL6Q6ICC9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 TSPY16P-201ENST00000449843 468 ntBASIC14.78□□□□□ -0.04
RTL6Q6ICC9 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 RARRES2P9-201ENST00000565168 469 ntBASIC14.78□□□□□ -0.04
RTL6Q6ICC9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 RN7SL204P-201ENST00000582831 262 ntBASIC14.78□□□□□ -0.04
RTL6Q6ICC9 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 AC013467.2-201ENST00000605472 835 ntBASIC14.78□□□□□ -0.04
RTL6Q6ICC9 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.78□□□□□ -0.04
RTL6Q6ICC9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RTL6Q6ICC9 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.77□□□□□ -0.04
RTL6Q6ICC9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.77□□□□□ -0.05
RTL6Q6ICC9 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 AC002472.2-201ENST00000442739 958 ntBASIC14.77□□□□□ -0.05
RTL6Q6ICC9 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 AC018529.1-201ENST00000613063 361 ntBASIC14.77□□□□□ -0.05
RTL6Q6ICC9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 AL603756.1-201ENST00000606511 2163 ntBASIC14.77□□□□□ -0.05
RTL6Q6ICC9 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RTL6Q6ICC9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.76□□□□□ -0.05
RTL6Q6ICC9 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms