Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
FREM1Q5H8C1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 MTHFR-217ENST00000641820 1569 ntBASIC14.32□□□□□ -0.12
FREM1Q5H8C1 HYMAI-201ENST00000635591 3347 ntBASIC14.32□□□□□ -0.12
FREM1Q5H8C1 CALY-203ENST00000368558 825 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 TEX28P1-201ENST00000613479 1221 ntBASIC14.32□□□□□ -0.12
FREM1Q5H8C1 TEX28P2-201ENST00000617764 1221 ntBASIC14.32□□□□□ -0.12
FREM1Q5H8C1 AC073592.8-201ENST00000624126 511 ntBASIC14.32□□□□□ -0.12
FREM1Q5H8C1 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.32□□□□□ -0.12
FREM1Q5H8C1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 AC018695.7-201ENST00000624587 2492 ntBASIC14.32□□□□□ -0.12
FREM1Q5H8C1 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.32□□□□□ -0.12
FREM1Q5H8C1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 AZGP1P1-201ENST00000411909 902 ntBASIC14.31□□□□□ -0.12
FREM1Q5H8C1 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
FREM1Q5H8C1 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 RN7SL204P-201ENST00000582831 262 ntBASIC14.3□□□□□ -0.12
FREM1Q5H8C1 AC004840.1-201ENST00000636359 365 ntBASIC14.3□□□□□ -0.12
FREM1Q5H8C1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
FREM1Q5H8C1 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms