Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AC018695.7-201ENST00000624587 2492 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 PCDHA1-201ENST00000378133 2726 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 MIR648-201ENST00000385046 94 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AL627223.1-201ENST00000416693 442 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AC254562.1-201ENST00000417586 456 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AC005237.2-201ENST00000434368 219 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AC245100.5-201ENST00000452108 331 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AC061975.2-201ENST00000581722 295 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AC024267.1-201ENST00000582320 895 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AC004835.2-201ENST00000603762 682 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AC134684.3-201ENST00000641758 218 ntBASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PRICKLE4Q2TBC4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 MIR1233-2-201ENST00000408138 82 ntBASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 MIR1233-1-201ENST00000408722 82 ntBASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 AC004967.1-201ENST00000453589 447 ntBASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 AL603832.2-201ENST00000566195 2125 ntBASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PRICKLE4Q2TBC4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 HLA-H-201ENST00000383620 1096 ntBASIC15.18■□□□□ 0.02
PRICKLE4Q2TBC4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms