Protein–RNA interactions for Protein: Q15386

UBE3C, Ubiquitin-protein ligase E3C, humanhuman

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3CQ15386 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3CQ15386 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3CQ15386 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3CQ15386 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3CQ15386 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.44■□□□□ 0.7
UBE3CQ15386 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBE3CQ15386 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.44■□□□□ 0.7
UBE3CQ15386 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3CQ15386 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UBE3CQ15386 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3CQ15386 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBE3CQ15386 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3CQ15386 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
UBE3CQ15386 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UBE3CQ15386 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.43■□□□□ 0.7
UBE3CQ15386 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC19.43■□□□□ 0.7
UBE3CQ15386 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
UBE3CQ15386 TEX28P1-201ENST00000613479 1221 ntBASIC19.43■□□□□ 0.7
UBE3CQ15386 TEX28P2-201ENST00000617764 1221 ntBASIC19.43■□□□□ 0.7
UBE3CQ15386 AL590560.3-201ENST00000623350 461 ntBASIC19.43■□□□□ 0.7
UBE3CQ15386 CYP4F24P-201ENST00000586049 1580 ntBASIC19.43■□□□□ 0.7
UBE3CQ15386 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3CQ15386 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.43■□□□□ 0.7
UBE3CQ15386 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC19.43■□□□□ 0.7
UBE3CQ15386 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
UBE3CQ15386 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
UBE3CQ15386 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC19.42■□□□□ 0.7
UBE3CQ15386 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBE3CQ15386 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
UBE3CQ15386 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE3CQ15386 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
UBE3CQ15386 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 TSSK5P-201ENST00000423978 907 ntBASIC19.42■□□□□ 0.7
UBE3CQ15386 AC241585.1-201ENST00000433527 519 ntBASIC19.42■□□□□ 0.7
UBE3CQ15386 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.42■□□□□ 0.7
UBE3CQ15386 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE3CQ15386 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.42■□□□□ 0.7
UBE3CQ15386 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.42■□□□□ 0.7
UBE3CQ15386 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.42■□□□□ 0.7
UBE3CQ15386 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
UBE3CQ15386 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
UBE3CQ15386 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 AL596087.1-201ENST00000400979 1969 ntBASIC19.42■□□□□ 0.7
UBE3CQ15386 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC19.42■□□□□ 0.7
UBE3CQ15386 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 KRT8P12-202ENST00000472924 1397 ntBASIC19.42■□□□□ 0.7
UBE3CQ15386 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
UBE3CQ15386 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 AC100757.3-201ENST00000622361 1406 ntBASIC19.42■□□□□ 0.7
UBE3CQ15386 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
UBE3CQ15386 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
UBE3CQ15386 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
UBE3CQ15386 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
UBE3CQ15386 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 HAUS4P1-201ENST00000406739 1145 ntBASIC19.41■□□□□ 0.7
UBE3CQ15386 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 BASP1P1-201ENST00000430708 665 ntBASIC19.41■□□□□ 0.7
UBE3CQ15386 IGHV3-42-201ENST00000520410 361 ntBASIC19.41■□□□□ 0.7
UBE3CQ15386 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC19.41■□□□□ 0.7
UBE3CQ15386 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
UBE3CQ15386 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBE3CQ15386 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
UBE3CQ15386 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
UBE3CQ15386 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
UBE3CQ15386 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
UBE3CQ15386 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms