Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
LTBQ06643 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 PCGF3-213ENST00000620529 1899 ntBASIC14.98□□□□□ -0.01
LTBQ06643 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.98□□□□□ -0.01
LTBQ06643 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.98□□□□□ -0.01
LTBQ06643 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
LTBQ06643 CRCP-205ENST00000431089 942 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.98□□□□□ -0.01
LTBQ06643 AL513480.1-201ENST00000451731 511 ntBASIC14.98□□□□□ -0.01
LTBQ06643 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
LTBQ06643 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
LTBQ06643 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
LTBQ06643 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
LTBQ06643 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.97□□□□□ -0.01
LTBQ06643 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 AL513523.2-202ENST00000427283 2040 ntBASIC14.97□□□□□ -0.01
LTBQ06643 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.97□□□□□ -0.01
LTBQ06643 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 AC092474.2-201ENST00000424288 719 ntBASIC14.97□□□□□ -0.01
LTBQ06643 RHOQP3-201ENST00000437982 621 ntBASIC14.97□□□□□ -0.01
LTBQ06643 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.97□□□□□ -0.01
LTBQ06643 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.97□□□□□ -0.01
LTBQ06643 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.97□□□□□ -0.01
LTBQ06643 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.97□□□□□ -0.01
LTBQ06643 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 AC010507.1-201ENST00000633895 436 ntBASIC14.97□□□□□ -0.01
LTBQ06643 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LTBQ06643 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
LTBQ06643 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 MTHFR-217ENST00000641820 1569 ntBASIC14.97□□□□□ -0.01
LTBQ06643 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC14.97□□□□□ -0.01
LTBQ06643 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
LTBQ06643 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.97□□□□□ -0.01
LTBQ06643 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
LTBQ06643 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
LTBQ06643 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.96□□□□□ -0.01
LTBQ06643 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms