Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HIST1H3AP68431 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HIST1H3AP68431 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 AC002347.1-201ENST00000569543 541 ntBASIC14.31□□□□□ -0.12
HIST1H3AP68431 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.31□□□□□ -0.12
HIST1H3AP68431 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HIST1H3AP68431 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 AL596257.1-201ENST00000641463 2694 ntBASIC14.3□□□□□ -0.12
HIST1H3AP68431 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 CICP6-201ENST00000457191 2729 ntBASIC14.3□□□□□ -0.12
HIST1H3AP68431 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 AC069224.1-201ENST00000566372 1715 ntBASIC14.3□□□□□ -0.12
HIST1H3AP68431 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 AC073389.1-201ENST00000595595 795 ntBASIC14.3□□□□□ -0.12
HIST1H3AP68431 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 AL365330.1-201ENST00000607459 531 ntBASIC14.3□□□□□ -0.12
HIST1H3AP68431 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
HIST1H3AP68431 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
HIST1H3AP68431 AL589702.1-201ENST00000641229 1509 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms