Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
PSMD4P55036 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
PSMD4P55036 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.29■□□□□ 0.04
PSMD4P55036 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 AL365209.1-201ENST00000624418 6473 ntBASIC15.28■□□□□ 0.04
PSMD4P55036 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PSMD4P55036 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMD4P55036 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PSMD4P55036 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.28■□□□□ 0.04
PSMD4P55036 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMD4P55036 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PSMD4P55036 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.28■□□□□ 0.04
PSMD4P55036 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 AC023274.1-201ENST00000418278 595 ntBASIC15.28■□□□□ 0.04
PSMD4P55036 MCCD1P2-201ENST00000423228 335 ntBASIC15.28■□□□□ 0.04
PSMD4P55036 AC004832.2-201ENST00000426397 482 ntBASIC15.28■□□□□ 0.04
PSMD4P55036 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.28■□□□□ 0.04
PSMD4P55036 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMD4P55036 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.28■□□□□ 0.04
PSMD4P55036 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 AC092865.6-201ENST00000642101 219 ntBASIC15.28■□□□□ 0.04
PSMD4P55036 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
PSMD4P55036 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
PSMD4P55036 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.28■□□□□ 0.04
PSMD4P55036 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
PSMD4P55036 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
PSMD4P55036 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.28■□□□□ 0.04
PSMD4P55036 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.27■□□□□ 0.04
PSMD4P55036 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD4P55036 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMD4P55036 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PSMD4P55036 WASH6P-202ENST00000359512 1437 ntBASIC15.27■□□□□ 0.04
PSMD4P55036 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.27■□□□□ 0.04
PSMD4P55036 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.27■□□□□ 0.04
PSMD4P55036 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD4P55036 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMD4P55036 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC15.27■□□□□ 0.04
PSMD4P55036 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMD4P55036 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD4P55036 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD4P55036 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
PSMD4P55036 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.27■□□□□ 0.04
PSMD4P55036 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMD4P55036 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.27■□□□□ 0.04
PSMD4P55036 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMD4P55036 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD4P55036 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC15.27■□□□□ 0.04
PSMD4P55036 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.27■□□□□ 0.04
PSMD4P55036 DNAJB3-201ENST00000446806 729 ntBASIC15.27■□□□□ 0.04
PSMD4P55036 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD4P55036 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMD4P55036 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.27■□□□□ 0.04
PSMD4P55036 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD4P55036 AP002472.1-201ENST00000577490 586 ntBASIC15.27■□□□□ 0.04
PSMD4P55036 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
PSMD4P55036 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.27■□□□□ 0.04
PSMD4P55036 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PSMD4P55036 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.27■□□□□ 0.03
PSMD4P55036 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.27■□□□□ 0.03
PSMD4P55036 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC15.27■□□□□ 0.03
PSMD4P55036 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
PSMD4P55036 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
PSMD4P55036 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.27■□□□□ 0.03
PSMD4P55036 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PSMD4P55036 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
PSMD4P55036 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.27■□□□□ 0.03
PSMD4P55036 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.27■□□□□ 0.03
PSMD4P55036 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PSMD4P55036 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PSMD4P55036 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms