Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCS2P54868 MIR4259-201ENST00000584466 101 ntBASIC18.74■□□□□ 0.59
HMGCS2P54868 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.74■□□□□ 0.59
HMGCS2P54868 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
HMGCS2P54868 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC18.74■□□□□ 0.59
HMGCS2P54868 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HMGCS2P54868 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS2P54868 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCS2P54868 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS2P54868 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMGCS2P54868 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS2P54868 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS2P54868 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HMGCS2P54868 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS2P54868 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
HMGCS2P54868 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
HMGCS2P54868 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMGCS2P54868 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCS2P54868 AC022494.1-201ENST00000466044 728 ntBASIC18.73■□□□□ 0.59
HMGCS2P54868 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMGCS2P54868 RARRES2P5-201ENST00000564013 466 ntBASIC18.73■□□□□ 0.59
HMGCS2P54868 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCS2P54868 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCS2P54868 AL033527.5-201ENST00000641382 801 ntBASIC18.73■□□□□ 0.59
HMGCS2P54868 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.73■□□□□ 0.59
HMGCS2P54868 AL645608.8-201ENST00000606034 2086 ntBASIC18.73■□□□□ 0.59
HMGCS2P54868 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS2P54868 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS2P54868 AC105020.1-201ENST00000435356 2205 ntBASIC18.73■□□□□ 0.59
HMGCS2P54868 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.73■□□□□ 0.59
HMGCS2P54868 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS2P54868 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
HMGCS2P54868 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HMGCS2P54868 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCS2P54868 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCS2P54868 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
HMGCS2P54868 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 RHOA-206ENST00000454011 889 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCS2P54868 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC18.72■□□□□ 0.59
HMGCS2P54868 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 FXR1-221ENST00000491674 365 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCS2P54868 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCS2P54868 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.72■□□□□ 0.59
HMGCS2P54868 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
HMGCS2P54868 AC008735.3-201ENST00000596646 500 ntBASIC18.72■□□□□ 0.59
HMGCS2P54868 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC18.72■□□□□ 0.59
HMGCS2P54868 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
HMGCS2P54868 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.72■□□□□ 0.59
HMGCS2P54868 UBALD1-205ENST00000590891 2641 ntBASIC18.71■□□□□ 0.59
HMGCS2P54868 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCS2P54868 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.71■□□□□ 0.59
HMGCS2P54868 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 RNF216P1-203ENST00000404404 2427 ntBASIC18.71■□□□□ 0.59
HMGCS2P54868 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
HMGCS2P54868 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCS2P54868 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 AC119751.2-201ENST00000504529 210 ntBASIC18.71■□□□□ 0.59
HMGCS2P54868 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC18.71■□□□□ 0.59
HMGCS2P54868 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
HMGCS2P54868 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.71■□□□□ 0.59
HMGCS2P54868 LINC01115-203ENST00000606068 577 ntBASIC18.71■□□□□ 0.59
HMGCS2P54868 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.71■□□□□ 0.59
HMGCS2P54868 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms