Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ATXN3P54252 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ATXN3P54252 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 RNF216P1-203ENST00000404404 2427 ntBASIC16.81■□□□□ 0.28
ATXN3P54252 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
ATXN3P54252 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.81■□□□□ 0.28
ATXN3P54252 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.81■□□□□ 0.28
ATXN3P54252 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.81■□□□□ 0.28
ATXN3P54252 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ATXN3P54252 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ATXN3P54252 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.81■□□□□ 0.28
ATXN3P54252 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.81■□□□□ 0.28
ATXN3P54252 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATXN3P54252 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ATXN3P54252 AL135744.1-201ENST00000565098 629 ntBASIC16.81■□□□□ 0.28
ATXN3P54252 RARRES2P8-201ENST00000566335 367 ntBASIC16.81■□□□□ 0.28
ATXN3P54252 AC051619.7-201ENST00000568314 623 ntBASIC16.81■□□□□ 0.28
ATXN3P54252 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.81■□□□□ 0.28
ATXN3P54252 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ATXN3P54252 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ATXN3P54252 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
ATXN3P54252 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ATXN3P54252 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
ATXN3P54252 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC16.8■□□□□ 0.28
ATXN3P54252 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC16.8■□□□□ 0.28
ATXN3P54252 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.8■□□□□ 0.28
ATXN3P54252 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.8■□□□□ 0.28
ATXN3P54252 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.8■□□□□ 0.28
ATXN3P54252 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
ATXN3P54252 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATXN3P54252 AKAP8P1-201ENST00000434743 1349 ntBASIC16.8■□□□□ 0.28
ATXN3P54252 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATXN3P54252 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC16.8■□□□□ 0.28
ATXN3P54252 SPDYE7P-202ENST00000420373 878 ntBASIC16.8■□□□□ 0.28
ATXN3P54252 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.8■□□□□ 0.28
ATXN3P54252 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 AC087163.2-201ENST00000457299 853 ntBASIC16.8■□□□□ 0.28
ATXN3P54252 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.8■□□□□ 0.28
ATXN3P54252 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.8■□□□□ 0.28
ATXN3P54252 RN7SL204P-201ENST00000582831 262 ntBASIC16.8■□□□□ 0.28
ATXN3P54252 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 LINC01451-201ENST00000623792 534 ntBASIC16.8■□□□□ 0.28
ATXN3P54252 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ATXN3P54252 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 AL391005.1-201ENST00000623953 2435 ntBASIC16.8■□□□□ 0.28
ATXN3P54252 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ATXN3P54252 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
ATXN3P54252 UXT-AS1-201ENST00000590504 1525 ntBASIC16.8■□□□□ 0.28
ATXN3P54252 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ATXN3P54252 AC046185.3-201ENST00000623228 1824 ntBASIC16.8■□□□□ 0.28
ATXN3P54252 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATXN3P54252 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.79■□□□□ 0.28
ATXN3P54252 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.79■□□□□ 0.28
ATXN3P54252 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATXN3P54252 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms