Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.12■□□□□ 0.17
LIMK1P53667 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
LIMK1P53667 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 MIR1908-201ENST00000410394 80 ntBASIC16.12■□□□□ 0.17
LIMK1P53667 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.12■□□□□ 0.17
LIMK1P53667 KRT43P-201ENST00000434019 910 ntBASIC16.12■□□□□ 0.17
LIMK1P53667 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.12■□□□□ 0.17
LIMK1P53667 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.12■□□□□ 0.17
LIMK1P53667 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC16.12■□□□□ 0.17
LIMK1P53667 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.12■□□□□ 0.17
LIMK1P53667 TPRX2P-201ENST00000535362 881 ntBASIC16.12■□□□□ 0.17
LIMK1P53667 AC123567.1-201ENST00000548294 1261 ntBASIC16.12■□□□□ 0.17
LIMK1P53667 AL512361.1-201ENST00000554200 418 ntBASIC16.12■□□□□ 0.17
LIMK1P53667 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.12■□□□□ 0.17
LIMK1P53667 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 MPDU1-223ENST00000582151 728 ntBASIC16.12■□□□□ 0.17
LIMK1P53667 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.12■□□□□ 0.17
LIMK1P53667 CTBP2P3-201ENST00000585629 1255 ntBASIC16.12■□□□□ 0.17
LIMK1P53667 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.12■□□□□ 0.17
LIMK1P53667 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.12■□□□□ 0.17
LIMK1P53667 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.12■□□□□ 0.17
LIMK1P53667 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.12■□□□□ 0.17
LIMK1P53667 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LIMK1P53667 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
LIMK1P53667 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.11■□□□□ 0.17
LIMK1P53667 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
LIMK1P53667 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.11■□□□□ 0.17
LIMK1P53667 AC098859.1-201ENST00000502915 1238 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 SPDYE18-201ENST00000510091 1050 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 MFF-223ENST00000524634 647 ntTSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.11■□□□□ 0.17
LIMK1P53667 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 AC044860.1-202ENST00000559481 777 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 AC008735.3-201ENST00000596646 500 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 AC093726.1-201ENST00000608064 963 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 TUBB1P2-201ENST00000422712 1306 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 TUBB1P1-201ENST00000503144 1300 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 DOC2GP-204ENST00000639052 2548 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.11■□□□□ 0.17
LIMK1P53667 PCDHA14-201ENST00000506751 2298 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.11■□□□□ 0.17
LIMK1P53667 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
LIMK1P53667 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK1P53667 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.1■□□□□ 0.17
LIMK1P53667 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK1P53667 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
LIMK1P53667 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.1■□□□□ 0.17
LIMK1P53667 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
LIMK1P53667 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK1P53667 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK1P53667 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK1P53667 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
LIMK1P53667 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16.1■□□□□ 0.17
LIMK1P53667 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.1■□□□□ 0.17
LIMK1P53667 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.1■□□□□ 0.17
LIMK1P53667 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK1P53667 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.1■□□□□ 0.17
LIMK1P53667 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
LIMK1P53667 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC16.1■□□□□ 0.17
LIMK1P53667 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.1■□□□□ 0.17
LIMK1P53667 AL583810.1-201ENST00000553344 1045 ntBASIC16.1■□□□□ 0.17
LIMK1P53667 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.1■□□□□ 0.17
LIMK1P53667 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
LIMK1P53667 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.1■□□□□ 0.17
LIMK1P53667 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms