Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PTCHD3P3-201ENST00000403073 906 ntBASIC15.41■□□□□ 0.06
SMSP52788 IGLL3P-201ENST00000412472 434 ntBASIC15.41■□□□□ 0.06
SMSP52788 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.41■□□□□ 0.06
SMSP52788 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.41■□□□□ 0.06
SMSP52788 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMSP52788 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.41■□□□□ 0.06
SMSP52788 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.41■□□□□ 0.06
SMSP52788 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
SMSP52788 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.41■□□□□ 0.06
SMSP52788 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.41■□□□□ 0.06
SMSP52788 AL031432.2-201ENST00000566714 459 ntBASIC15.41■□□□□ 0.06
SMSP52788 AL928711.1-201ENST00000570165 459 ntBASIC15.41■□□□□ 0.06
SMSP52788 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.41■□□□□ 0.06
SMSP52788 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.41■□□□□ 0.06
SMSP52788 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.41■□□□□ 0.06
SMSP52788 LINC00895-201ENST00000629028 1637 ntBASIC15.41■□□□□ 0.06
SMSP52788 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SMSP52788 ME2P1-201ENST00000426028 1970 ntBASIC15.41■□□□□ 0.06
SMSP52788 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMSP52788 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
SMSP52788 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.41■□□□□ 0.06
SMSP52788 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMSP52788 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMSP52788 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SMSP52788 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMSP52788 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SMSP52788 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMSP52788 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMSP52788 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SMSP52788 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.41■□□□□ 0.06
SMSP52788 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
SMSP52788 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.4■□□□□ 0.06
SMSP52788 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SMSP52788 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SMSP52788 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC15.4■□□□□ 0.06
SMSP52788 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SMSP52788 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
SMSP52788 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC15.4■□□□□ 0.06
SMSP52788 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.4■□□□□ 0.06
SMSP52788 RHOQP3-201ENST00000437982 621 ntBASIC15.4■□□□□ 0.06
SMSP52788 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.4■□□□□ 0.06
SMSP52788 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.4■□□□□ 0.06
SMSP52788 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.4■□□□□ 0.06
SMSP52788 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.4■□□□□ 0.06
SMSP52788 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 AC025580.3-201ENST00000617932 1424 ntBASIC15.4■□□□□ 0.06
SMSP52788 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SMSP52788 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.4■□□□□ 0.06
SMSP52788 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.4■□□□□ 0.06
SMSP52788 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.4■□□□□ 0.06
SMSP52788 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SMSP52788 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.4■□□□□ 0.06
SMSP52788 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
SMSP52788 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.06
SMSP52788 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.39■□□□□ 0.05
SMSP52788 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SMSP52788 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
SMSP52788 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SMSP52788 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SMSP52788 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SMSP52788 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SMSP52788 ACTG1P4-201ENST00000425123 1122 ntBASIC15.39■□□□□ 0.05
SMSP52788 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.39■□□□□ 0.05
SMSP52788 AC025678.2-201ENST00000562061 970 ntBASIC15.39■□□□□ 0.05
SMSP52788 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SMSP52788 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.39■□□□□ 0.05
SMSP52788 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.39■□□□□ 0.05
SMSP52788 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SMSP52788 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.39■□□□□ 0.05
SMSP52788 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC15.39■□□□□ 0.05
SMSP52788 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.39■□□□□ 0.05
SMSP52788 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms