Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.12■□□□□ 0.33
CLCN4P51793 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 MIR1909-201ENST00000411312 80 ntBASIC17.12■□□□□ 0.33
CLCN4P51793 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN4P51793 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.12■□□□□ 0.33
CLCN4P51793 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN4P51793 ELK1P1-201ENST00000485699 580 ntBASIC17.12■□□□□ 0.33
CLCN4P51793 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN4P51793 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN4P51793 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN4P51793 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 KRT17P8-201ENST00000540749 863 ntBASIC17.12■□□□□ 0.33
CLCN4P51793 AC123567.1-201ENST00000548294 1261 ntBASIC17.12■□□□□ 0.33
CLCN4P51793 CTBP2P3-201ENST00000585629 1255 ntBASIC17.12■□□□□ 0.33
CLCN4P51793 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN4P51793 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.12■□□□□ 0.33
CLCN4P51793 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CLCN4P51793 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.12■□□□□ 0.33
CLCN4P51793 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCN4P51793 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.11■□□□□ 0.33
CLCN4P51793 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN4P51793 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.11■□□□□ 0.33
CLCN4P51793 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLCN4P51793 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.11■□□□□ 0.33
CLCN4P51793 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN4P51793 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN4P51793 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.11■□□□□ 0.33
CLCN4P51793 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCN4P51793 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CLCN4P51793 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CLCN4P51793 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CLCN4P51793 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.11■□□□□ 0.33
CLCN4P51793 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CLCN4P51793 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CLCN4P51793 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 AC012313.1-201ENST00000593393 3059 ntBASIC17.1■□□□□ 0.33
CLCN4P51793 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CLCN4P51793 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN4P51793 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN4P51793 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN4P51793 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CLCN4P51793 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN4P51793 RAD18-204ENST00000418463 563 ntTSL 4 BASIC17.1■□□□□ 0.33
CLCN4P51793 RAD18-205ENST00000421052 582 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN4P51793 RPS2P32-201ENST00000439199 892 ntBASIC17.1■□□□□ 0.33
CLCN4P51793 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN4P51793 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.1■□□□□ 0.33
CLCN4P51793 RAB43P1-201ENST00000561790 589 ntBASIC17.1■□□□□ 0.33
CLCN4P51793 AC092337.1-201ENST00000568699 1129 ntBASIC17.1■□□□□ 0.33
CLCN4P51793 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN4P51793 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN4P51793 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC17.1■□□□□ 0.33
CLCN4P51793 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CLCN4P51793 MIR6805-201ENST00000615055 62 ntBASIC17.1■□□□□ 0.33
CLCN4P51793 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
CLCN4P51793 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
CLCN4P51793 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CLCN4P51793 AD000864.1-201ENST00000624076 2295 ntBASIC17.09■□□□□ 0.33
CLCN4P51793 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms