Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 AC091812.2-201ENST00000619081 385 ntBASIC14.6□□□□□ -0.07
CSNK1A1P48729 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.6□□□□□ -0.07
CSNK1A1P48729 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CSNK1A1P48729 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 DOC2GP-204ENST00000639052 2548 ntBASIC14.59□□□□□ -0.07
CSNK1A1P48729 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 FAM58CP-201ENST00000435741 640 ntBASIC14.59□□□□□ -0.07
CSNK1A1P48729 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 PGAM5P1-201ENST00000518923 814 ntBASIC14.59□□□□□ -0.07
CSNK1A1P48729 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
CSNK1A1P48729 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CSNK1A1P48729 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
CSNK1A1P48729 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CSNK1A1P48729 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.58□□□□□ -0.07
CSNK1A1P48729 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.58□□□□□ -0.07
CSNK1A1P48729 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CSNK1A1P48729 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CSNK1A1P48729 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CSNK1A1P48729 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.58□□□□□ -0.07
CSNK1A1P48729 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 AC006449.6-201ENST00000612330 2296 ntBASIC14.58□□□□□ -0.08
CSNK1A1P48729 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 AC008894.3-201ENST00000624324 3103 ntBASIC14.58□□□□□ -0.08
CSNK1A1P48729 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CSNK1A1P48729 MCCD1P2-201ENST00000423228 335 ntBASIC14.58□□□□□ -0.08
CSNK1A1P48729 AC004832.2-201ENST00000426397 482 ntBASIC14.58□□□□□ -0.08
CSNK1A1P48729 AP000347.1-202ENST00000435868 847 ntBASIC14.58□□□□□ -0.08
CSNK1A1P48729 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.58□□□□□ -0.08
CSNK1A1P48729 RARRES2P8-201ENST00000566335 367 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms