Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP13P45452 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP13P45452 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP13P45452 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
MMP13P45452 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.05■□□□□ 0.32
MMP13P45452 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
MMP13P45452 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.05■□□□□ 0.32
MMP13P45452 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MMP13P45452 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
MMP13P45452 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
MMP13P45452 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP13P45452 AP000347.1-202ENST00000435868 847 ntBASIC17.05■□□□□ 0.32
MMP13P45452 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP13P45452 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP13P45452 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
MMP13P45452 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP13P45452 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP13P45452 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP13P45452 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
MMP13P45452 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
MMP13P45452 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC17.05■□□□□ 0.32
MMP13P45452 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP13P45452 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.05■□□□□ 0.32
MMP13P45452 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
MMP13P45452 KRT8P39-201ENST00000396270 1433 ntBASIC17.04■□□□□ 0.32
MMP13P45452 AC025580.3-201ENST00000617932 1424 ntBASIC17.04■□□□□ 0.32
MMP13P45452 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MMP13P45452 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.04■□□□□ 0.32
MMP13P45452 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
MMP13P45452 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
MMP13P45452 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MMP13P45452 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP13P45452 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.04■□□□□ 0.32
MMP13P45452 HMGA1P7-201ENST00000406908 502 ntBASIC17.04■□□□□ 0.32
MMP13P45452 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP13P45452 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.04■□□□□ 0.32
MMP13P45452 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.04■□□□□ 0.32
MMP13P45452 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
MMP13P45452 KRT19P2-202ENST00000557173 1012 ntBASIC17.04■□□□□ 0.32
MMP13P45452 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.04■□□□□ 0.32
MMP13P45452 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 AC073347.1-201ENST00000421633 2643 ntBASIC17.04■□□□□ 0.32
MMP13P45452 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
MMP13P45452 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP13P45452 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.04■□□□□ 0.32
MMP13P45452 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
MMP13P45452 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
MMP13P45452 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
MMP13P45452 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
MMP13P45452 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
MMP13P45452 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.03■□□□□ 0.32
MMP13P45452 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.03■□□□□ 0.32
MMP13P45452 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.03■□□□□ 0.32
MMP13P45452 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.03■□□□□ 0.32
MMP13P45452 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
MMP13P45452 SLC9A3P2-201ENST00000447821 2021 ntBASIC17.03■□□□□ 0.32
MMP13P45452 LINC02228-204ENST00000642115 2962 ntBASIC17.03■□□□□ 0.32
MMP13P45452 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
MMP13P45452 AC013268.4-201ENST00000637413 2228 ntBASIC17.03■□□□□ 0.32
MMP13P45452 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms