Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 GPALPP1-207ENST00000611650 899 ntBASIC16.61■□□□□ 0.25
HADHAP40939 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.61■□□□□ 0.25
HADHAP40939 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
HADHAP40939 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
HADHAP40939 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HADHAP40939 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.61■□□□□ 0.25
HADHAP40939 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
HADHAP40939 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.61■□□□□ 0.25
HADHAP40939 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
HADHAP40939 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.61■□□□□ 0.25
HADHAP40939 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.61■□□□□ 0.25
HADHAP40939 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
HADHAP40939 PCGF3-213ENST00000620529 1899 ntBASIC16.61■□□□□ 0.25
HADHAP40939 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
HADHAP40939 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
HADHAP40939 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.6■□□□□ 0.25
HADHAP40939 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
HADHAP40939 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.6■□□□□ 0.25
HADHAP40939 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.6■□□□□ 0.25
HADHAP40939 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
HADHAP40939 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
HADHAP40939 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
HADHAP40939 AC074386.1-202ENST00000463561 864 ntBASIC16.6■□□□□ 0.25
HADHAP40939 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.6■□□□□ 0.25
HADHAP40939 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 AL009183.1-201ENST00000603760 355 ntBASIC16.6■□□□□ 0.25
HADHAP40939 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
HADHAP40939 AL513477.1-201ENST00000602865 2407 ntBASIC16.6■□□□□ 0.25
HADHAP40939 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16.6■□□□□ 0.25
HADHAP40939 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
HADHAP40939 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.6■□□□□ 0.25
HADHAP40939 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
HADHAP40939 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
HADHAP40939 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
HADHAP40939 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.59■□□□□ 0.25
HADHAP40939 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.59■□□□□ 0.25
HADHAP40939 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HADHAP40939 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
HADHAP40939 AC068137.2-201ENST00000605408 478 ntBASIC16.59■□□□□ 0.25
HADHAP40939 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.59■□□□□ 0.25
HADHAP40939 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.59■□□□□ 0.25
HADHAP40939 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HADHAP40939 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.59■□□□□ 0.25
HADHAP40939 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms