Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.33□□□□□ -0.12
GDNFP39905 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GDNFP39905 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
GDNFP39905 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.33□□□□□ -0.12
GDNFP39905 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
GDNFP39905 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.33□□□□□ -0.12
GDNFP39905 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.33□□□□□ -0.12
GDNFP39905 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.33□□□□□ -0.12
GDNFP39905 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.33□□□□□ -0.12
GDNFP39905 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC14.33□□□□□ -0.12
GDNFP39905 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.33□□□□□ -0.12
GDNFP39905 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 PMPCAP1-201ENST00000508114 1576 ntBASIC14.33□□□□□ -0.12
GDNFP39905 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.33□□□□□ -0.12
GDNFP39905 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
GDNFP39905 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
GDNFP39905 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
GDNFP39905 AC097637.2-201ENST00000624096 1997 ntBASIC14.33□□□□□ -0.12
GDNFP39905 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GDNFP39905 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GDNFP39905 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
GDNFP39905 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.32□□□□□ -0.12
GDNFP39905 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.32□□□□□ -0.12
GDNFP39905 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
GDNFP39905 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
GDNFP39905 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.32□□□□□ -0.12
GDNFP39905 KLF4P1-201ENST00000412782 1185 ntBASIC14.32□□□□□ -0.12
GDNFP39905 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.32□□□□□ -0.12
GDNFP39905 NUS1P1-201ENST00000446295 882 ntBASIC14.32□□□□□ -0.12
GDNFP39905 AC132008.2-207ENST00000454517 770 ntBASIC14.32□□□□□ -0.12
GDNFP39905 PRR29-207ENST00000580752 458 ntTSL 3 BASIC14.32□□□□□ -0.12
GDNFP39905 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 CLEC4GP1-201ENST00000596555 870 ntBASIC14.32□□□□□ -0.12
GDNFP39905 AP001269.4-201ENST00000609611 512 ntBASIC14.32□□□□□ -0.12
GDNFP39905 AP000867.4-201ENST00000641616 219 ntBASIC14.32□□□□□ -0.12
GDNFP39905 AC006277.1-201ENST00000624348 1610 ntBASIC14.32□□□□□ -0.12
GDNFP39905 AC148477.5-201ENST00000625164 1645 ntBASIC14.32□□□□□ -0.12
GDNFP39905 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.32□□□□□ -0.12
GDNFP39905 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
GDNFP39905 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.32□□□□□ -0.12
GDNFP39905 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
GDNFP39905 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 FOS-208ENST00000555686 1496 ntTSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
GDNFP39905 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.31□□□□□ -0.12
GDNFP39905 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.31□□□□□ -0.12
GDNFP39905 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
GDNFP39905 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.31□□□□□ -0.12
GDNFP39905 ABCD1P5-201ENST00000445663 754 ntBASIC14.31□□□□□ -0.12
GDNFP39905 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms