Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.49■□□□□ 0.23
LSP1P33241 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LSP1P33241 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
LSP1P33241 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.49■□□□□ 0.23
LSP1P33241 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.49■□□□□ 0.23
LSP1P33241 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 HMGA1P5-201ENST00000412453 271 ntBASIC16.49■□□□□ 0.23
LSP1P33241 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
LSP1P33241 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.49■□□□□ 0.23
LSP1P33241 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
LSP1P33241 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
LSP1P33241 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.49■□□□□ 0.23
LSP1P33241 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LSP1P33241 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LSP1P33241 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.49■□□□□ 0.23
LSP1P33241 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.49■□□□□ 0.23
LSP1P33241 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.49■□□□□ 0.23
LSP1P33241 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.48■□□□□ 0.23
LSP1P33241 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
LSP1P33241 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.48■□□□□ 0.23
LSP1P33241 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LSP1P33241 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LSP1P33241 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC16.48■□□□□ 0.23
LSP1P33241 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.48■□□□□ 0.23
LSP1P33241 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
LSP1P33241 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.48■□□□□ 0.23
LSP1P33241 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.48■□□□□ 0.23
LSP1P33241 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
LSP1P33241 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.48■□□□□ 0.23
LSP1P33241 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LSP1P33241 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.48■□□□□ 0.23
LSP1P33241 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
LSP1P33241 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LSP1P33241 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LSP1P33241 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LSP1P33241 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
LSP1P33241 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 AC068587.6-202ENST00000641839 5619 ntBASIC16.47■□□□□ 0.23
LSP1P33241 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC16.47■□□□□ 0.23
LSP1P33241 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.47■□□□□ 0.23
LSP1P33241 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LSP1P33241 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.47■□□□□ 0.23
LSP1P33241 AD001527.2-201ENST00000622994 785 ntBASIC16.47■□□□□ 0.23
LSP1P33241 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LSP1P33241 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LSP1P33241 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.47■□□□□ 0.23
LSP1P33241 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LSP1P33241 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms