Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
HOXA11P31270 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXA11P31270 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXA11P31270 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 AC004987.2-201ENST00000395959 1148 ntBASIC17.55■□□□□ 0.4
HOXA11P31270 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXA11P31270 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.55■□□□□ 0.4
HOXA11P31270 CDK4-206ENST00000549606 558 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HOXA11P31270 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
HOXA11P31270 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HOXA11P31270 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA11P31270 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
HOXA11P31270 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HOXA11P31270 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC17.54■□□□□ 0.4
HOXA11P31270 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA11P31270 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
HOXA11P31270 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXA11P31270 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.54■□□□□ 0.4
HOXA11P31270 AL353779.1-201ENST00000434793 351 ntBASIC17.54■□□□□ 0.4
HOXA11P31270 EEF1DP4-201ENST00000446006 880 ntBASIC17.54■□□□□ 0.4
HOXA11P31270 DOC2GP-202ENST00000514950 1163 ntBASIC17.54■□□□□ 0.4
HOXA11P31270 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA11P31270 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HOXA11P31270 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.54■□□□□ 0.4
HOXA11P31270 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
HOXA11P31270 AL596325.1-201ENST00000563991 1082 ntBASIC17.54■□□□□ 0.4
HOXA11P31270 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.54■□□□□ 0.4
HOXA11P31270 AL132655.2-201ENST00000596276 594 ntBASIC17.54■□□□□ 0.4
HOXA11P31270 SRD5A3P1-201ENST00000603021 949 ntBASIC17.54■□□□□ 0.4
HOXA11P31270 AC239800.4-201ENST00000603712 296 ntBASIC17.54■□□□□ 0.4
HOXA11P31270 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXA11P31270 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HOXA11P31270 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
HOXA11P31270 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
HOXA11P31270 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.54■□□□□ 0.4
HOXA11P31270 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HOXA11P31270 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms