Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP11P24347 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP11P24347 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MMP11P24347 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 AC006277.1-201ENST00000624348 1610 ntBASIC15.55■□□□□ 0.08
MMP11P24347 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
MMP11P24347 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MMP11P24347 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
MMP11P24347 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.55■□□□□ 0.08
MMP11P24347 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
MMP11P24347 FAM8A3P-201ENST00000427218 844 ntBASIC15.55■□□□□ 0.08
MMP11P24347 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP11P24347 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.55■□□□□ 0.08
MMP11P24347 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.55■□□□□ 0.08
MMP11P24347 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.55■□□□□ 0.08
MMP11P24347 SPCS2P1-201ENST00000561636 679 ntBASIC15.55■□□□□ 0.08
MMP11P24347 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MMP11P24347 LINC02084-201ENST00000606069 1096 ntBASIC15.55■□□□□ 0.08
MMP11P24347 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.55■□□□□ 0.08
MMP11P24347 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP11P24347 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
MMP11P24347 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP11P24347 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP11P24347 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP11P24347 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
MMP11P24347 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP11P24347 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.54■□□□□ 0.08
MMP11P24347 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP11P24347 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.54■□□□□ 0.08
MMP11P24347 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP11P24347 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
MMP11P24347 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC15.54■□□□□ 0.08
MMP11P24347 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.54■□□□□ 0.08
MMP11P24347 SPDYE14P-201ENST00000442619 822 ntBASIC15.54■□□□□ 0.08
MMP11P24347 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 KLF2P3-201ENST00000451977 1087 ntBASIC15.54■□□□□ 0.08
MMP11P24347 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC15.54■□□□□ 0.08
MMP11P24347 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.54■□□□□ 0.08
MMP11P24347 ALG1L8P-201ENST00000533887 760 ntBASIC15.54■□□□□ 0.08
MMP11P24347 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP11P24347 DUT-210ENST00000559935 569 ntTSL 3 BASIC15.54■□□□□ 0.08
MMP11P24347 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MMP11P24347 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 AC005498.2-205ENST00000593218 784 ntBASIC15.54■□□□□ 0.08
MMP11P24347 NKG7-205ENST00000600427 520 ntTSL 3 BASIC15.54■□□□□ 0.08
MMP11P24347 AL096865.1-201ENST00000606796 927 ntBASIC15.54■□□□□ 0.08
MMP11P24347 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.54■□□□□ 0.08
MMP11P24347 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.54■□□□□ 0.08
MMP11P24347 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MMP11P24347 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 NARF-206ENST00000457415 1668 ntTSL 5 BASIC15.54■□□□□ 0.08
MMP11P24347 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MMP11P24347 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP11P24347 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
MMP11P24347 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MMP11P24347 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.53■□□□□ 0.08
MMP11P24347 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MMP11P24347 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms