Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.95□□□□□ -0.18
BCL3P20749 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
BCL3P20749 AL162727.3-201ENST00000635661 2787 ntBASIC13.95□□□□□ -0.18
BCL3P20749 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
BCL3P20749 HLA-A-201ENST00000376802 1334 ntBASIC13.95□□□□□ -0.18
BCL3P20749 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.95□□□□□ -0.18
BCL3P20749 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
BCL3P20749 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
BCL3P20749 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC13.95□□□□□ -0.18
BCL3P20749 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.95□□□□□ -0.18
BCL3P20749 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC13.95□□□□□ -0.18
BCL3P20749 TPM4P1-201ENST00000436100 807 ntBASIC13.95□□□□□ -0.18
BCL3P20749 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.95□□□□□ -0.18
BCL3P20749 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.95□□□□□ -0.18
BCL3P20749 AC096734.2-201ENST00000562054 433 ntBASIC13.95□□□□□ -0.18
BCL3P20749 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.95□□□□□ -0.18
BCL3P20749 MIR3909-201ENST00000579518 119 ntBASIC13.95□□□□□ -0.18
BCL3P20749 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.95□□□□□ -0.18
BCL3P20749 Z83851.2-201ENST00000609564 659 ntBASIC13.95□□□□□ -0.18
BCL3P20749 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC13.95□□□□□ -0.18
BCL3P20749 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.95□□□□□ -0.18
BCL3P20749 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.95□□□□□ -0.18
BCL3P20749 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
BCL3P20749 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
BCL3P20749 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.94□□□□□ -0.18
BCL3P20749 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
BCL3P20749 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC13.94□□□□□ -0.18
BCL3P20749 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.94□□□□□ -0.18
BCL3P20749 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC13.94□□□□□ -0.18
BCL3P20749 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
BCL3P20749 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC13.94□□□□□ -0.18
BCL3P20749 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.94□□□□□ -0.18
BCL3P20749 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.94□□□□□ -0.18
BCL3P20749 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
BCL3P20749 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.94□□□□□ -0.18
BCL3P20749 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC13.94□□□□□ -0.18
BCL3P20749 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC13.94□□□□□ -0.18
BCL3P20749 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.94□□□□□ -0.18
BCL3P20749 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.94□□□□□ -0.18
BCL3P20749 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.94□□□□□ -0.18
BCL3P20749 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
BCL3P20749 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms