Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC3P19447 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
ERCC3P19447 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
ERCC3P19447 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.93■□□□□ 0.62
ERCC3P19447 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.93■□□□□ 0.62
ERCC3P19447 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 RPL37AP1-201ENST00000412502 279 ntBASIC18.93■□□□□ 0.62
ERCC3P19447 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.93■□□□□ 0.62
ERCC3P19447 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
ERCC3P19447 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC3P19447 AC098859.1-201ENST00000502915 1238 ntBASIC18.93■□□□□ 0.62
ERCC3P19447 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ERCC3P19447 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC3P19447 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.93■□□□□ 0.62
ERCC3P19447 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 AL589739.1-201ENST00000607720 493 ntBASIC18.93■□□□□ 0.62
ERCC3P19447 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.93■□□□□ 0.62
ERCC3P19447 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
ERCC3P19447 CETN4P-206ENST00000642099 2168 ntBASIC18.93■□□□□ 0.62
ERCC3P19447 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.93■□□□□ 0.62
ERCC3P19447 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
ERCC3P19447 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
ERCC3P19447 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
ERCC3P19447 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 FLJ38576-201ENST00000623820 2459 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 SNX33P1-201ENST00000592116 1762 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 NME2P1-201ENST00000426182 414 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.92■□□□□ 0.62
ERCC3P19447 RN7SL692P-201ENST00000464677 288 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.92■□□□□ 0.62
ERCC3P19447 CR383656.12-201ENST00000549567 513 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 BANF1P1-201ENST00000553684 263 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.92■□□□□ 0.62
ERCC3P19447 AL844908.2-201ENST00000609461 460 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 AC008738.7-201ENST00000609744 511 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 AC087499.5-201ENST00000452760 1342 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 AGGF1P2-201ENST00000426656 2106 ntBASIC18.92■□□□□ 0.62
ERCC3P19447 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.92■□□□□ 0.62
ERCC3P19447 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
ERCC3P19447 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
ERCC3P19447 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC18.91■□□□□ 0.62
ERCC3P19447 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.91■□□□□ 0.62
ERCC3P19447 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.91■□□□□ 0.62
ERCC3P19447 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
ERCC3P19447 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.91■□□□□ 0.62
ERCC3P19447 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms