Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.24■□□□□ 0.03
PRKCAP17252 AC092171.3-201ENST00000610122 2651 ntBASIC15.24■□□□□ 0.03
PRKCAP17252 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
PRKCAP17252 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PRKCAP17252 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
PRKCAP17252 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PRKCAP17252 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 AC012569.1-201ENST00000591191 1524 ntBASIC15.23■□□□□ 0.03
PRKCAP17252 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC15.23■□□□□ 0.03
PRKCAP17252 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.23■□□□□ 0.03
PRKCAP17252 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.23■□□□□ 0.03
PRKCAP17252 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
PRKCAP17252 MED15P5-201ENST00000423150 992 ntBASIC15.23■□□□□ 0.03
PRKCAP17252 KRT18P2-201ENST00000447938 1258 ntBASIC15.23■□□□□ 0.03
PRKCAP17252 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.23■□□□□ 0.03
PRKCAP17252 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.23■□□□□ 0.03
PRKCAP17252 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.23■□□□□ 0.03
PRKCAP17252 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.23■□□□□ 0.03
PRKCAP17252 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.23■□□□□ 0.03
PRKCAP17252 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.23■□□□□ 0.03
PRKCAP17252 FAM197Y3-203ENST00000618346 717 ntBASIC15.23■□□□□ 0.03
PRKCAP17252 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 SNX33P1-201ENST00000592116 1762 ntBASIC15.23■□□□□ 0.03
PRKCAP17252 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.23■□□□□ 0.03
PRKCAP17252 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.23■□□□□ 0.03
PRKCAP17252 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
PRKCAP17252 HLA-A-202ENST00000376806 1854 ntBASIC15.23■□□□□ 0.03
PRKCAP17252 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PRKCAP17252 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
PRKCAP17252 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.22■□□□□ 0.03
PRKCAP17252 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PRKCAP17252 HLA-J-202ENST00000469281 1241 ntBASIC15.22■□□□□ 0.03
PRKCAP17252 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.22■□□□□ 0.03
PRKCAP17252 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
PRKCAP17252 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.22■□□□□ 0.03
PRKCAP17252 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.22■□□□□ 0.03
PRKCAP17252 AC018845.2-201ENST00000568326 409 ntBASIC15.22■□□□□ 0.03
PRKCAP17252 AQP6-205ENST00000618286 829 ntTSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.22■□□□□ 0.03
PRKCAP17252 AL645728.2-201ENST00000641974 660 ntBASIC15.22■□□□□ 0.03
PRKCAP17252 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PRKCAP17252 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PRKCAP17252 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.22■□□□□ 0.03
PRKCAP17252 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms