Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITGA4P13612 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.98■□□□□ 0.47
ITGA4P13612 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ITGA4P13612 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.98■□□□□ 0.47
ITGA4P13612 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.98■□□□□ 0.47
ITGA4P13612 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ITGA4P13612 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.98■□□□□ 0.47
ITGA4P13612 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.97■□□□□ 0.47
ITGA4P13612 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.97■□□□□ 0.47
ITGA4P13612 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ITGA4P13612 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.97■□□□□ 0.47
ITGA4P13612 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.97■□□□□ 0.47
ITGA4P13612 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.97■□□□□ 0.47
ITGA4P13612 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
ITGA4P13612 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC17.97■□□□□ 0.47
ITGA4P13612 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.97■□□□□ 0.47
ITGA4P13612 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.97■□□□□ 0.47
ITGA4P13612 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.97■□□□□ 0.47
ITGA4P13612 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.97■□□□□ 0.47
ITGA4P13612 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.97■□□□□ 0.47
ITGA4P13612 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
ITGA4P13612 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.97■□□□□ 0.47
ITGA4P13612 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.97■□□□□ 0.47
ITGA4P13612 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ITGA4P13612 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.96■□□□□ 0.47
ITGA4P13612 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.96■□□□□ 0.47
ITGA4P13612 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ITGA4P13612 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
ITGA4P13612 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 FO538757.1-201ENST00000623083 1397 ntBASIC17.96■□□□□ 0.47
ITGA4P13612 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.96■□□□□ 0.47
ITGA4P13612 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
ITGA4P13612 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.96■□□□□ 0.47
ITGA4P13612 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.96■□□□□ 0.47
ITGA4P13612 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 TREML5P-201ENST00000421694 576 ntBASIC17.96■□□□□ 0.47
ITGA4P13612 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.96■□□□□ 0.47
ITGA4P13612 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.96■□□□□ 0.47
ITGA4P13612 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.96■□□□□ 0.47
ITGA4P13612 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.96■□□□□ 0.47
ITGA4P13612 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.96■□□□□ 0.47
ITGA4P13612 MIR4453-201ENST00000584019 89 ntBASIC17.96■□□□□ 0.47
ITGA4P13612 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC17.96■□□□□ 0.47
ITGA4P13612 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.96■□□□□ 0.47
ITGA4P13612 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
ITGA4P13612 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ITGA4P13612 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC17.96■□□□□ 0.47
ITGA4P13612 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.96■□□□□ 0.47
ITGA4P13612 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ITGA4P13612 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
ITGA4P13612 AP3S2-216ENST00000617003 1561 ntBASIC17.96■□□□□ 0.46
ITGA4P13612 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
ITGA4P13612 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
ITGA4P13612 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
ITGA4P13612 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.95■□□□□ 0.46
ITGA4P13612 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.95■□□□□ 0.46
ITGA4P13612 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
ITGA4P13612 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms