Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.4□□□□□ -0.26
DEFA4P12838 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.4□□□□□ -0.26
DEFA4P12838 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.4□□□□□ -0.26
DEFA4P12838 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 AL139424.1-201ENST00000607572 797 ntBASIC13.4□□□□□ -0.26
DEFA4P12838 REXO1L6P-202ENST00000619970 1078 ntBASIC13.4□□□□□ -0.26
DEFA4P12838 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.4□□□□□ -0.26
DEFA4P12838 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC13.4□□□□□ -0.26
DEFA4P12838 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
DEFA4P12838 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.4□□□□□ -0.26
DEFA4P12838 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA4P12838 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA4P12838 AC092384.3-202ENST00000564646 2873 ntBASIC13.39□□□□□ -0.27
DEFA4P12838 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA4P12838 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.39□□□□□ -0.27
DEFA4P12838 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA4P12838 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.39□□□□□ -0.27
DEFA4P12838 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA4P12838 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA4P12838 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC13.39□□□□□ -0.27
DEFA4P12838 AC010491.1-201ENST00000563101 2797 ntBASIC13.39□□□□□ -0.27
DEFA4P12838 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA4P12838 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
DEFA4P12838 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC13.39□□□□□ -0.27
DEFA4P12838 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC13.39□□□□□ -0.27
DEFA4P12838 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
DEFA4P12838 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
DEFA4P12838 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.38□□□□□ -0.27
DEFA4P12838 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
DEFA4P12838 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
DEFA4P12838 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.38□□□□□ -0.27
DEFA4P12838 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
DEFA4P12838 FGFR3P6-201ENST00000457012 610 ntBASIC13.38□□□□□ -0.27
DEFA4P12838 KRT18P56-201ENST00000507275 550 ntBASIC13.38□□□□□ -0.27
DEFA4P12838 SART3-203ENST00000546611 1184 ntBASIC13.38□□□□□ -0.27
DEFA4P12838 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.38□□□□□ -0.27
DEFA4P12838 TERC-201ENST00000602385 541 ntBASIC13.38□□□□□ -0.27
DEFA4P12838 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC13.38□□□□□ -0.27
DEFA4P12838 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC13.38□□□□□ -0.27
DEFA4P12838 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
DEFA4P12838 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.38□□□□□ -0.27
DEFA4P12838 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms