Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.02■□□□□ 0.16
PCNAP12004 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCNAP12004 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCNAP12004 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCNAP12004 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.02■□□□□ 0.16
PCNAP12004 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.02■□□□□ 0.16
PCNAP12004 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.02■□□□□ 0.16
PCNAP12004 MIR4515-201ENST00000584082 81 ntBASIC16.02■□□□□ 0.16
PCNAP12004 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
PCNAP12004 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCNAP12004 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.02■□□□□ 0.15
PCNAP12004 AC103702.1-201ENST00000548801 2630 ntBASIC16.02■□□□□ 0.15
PCNAP12004 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCNAP12004 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.02■□□□□ 0.15
PCNAP12004 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.02■□□□□ 0.15
PCNAP12004 ME2P1-201ENST00000426028 1970 ntBASIC16.02■□□□□ 0.15
PCNAP12004 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCNAP12004 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.02■□□□□ 0.15
PCNAP12004 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PCNAP12004 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCNAP12004 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PCNAP12004 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
PCNAP12004 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PCNAP12004 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.02■□□□□ 0.15
PCNAP12004 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
PCNAP12004 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.01■□□□□ 0.15
PCNAP12004 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.01■□□□□ 0.15
PCNAP12004 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.01■□□□□ 0.15
PCNAP12004 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 IGLL3P-201ENST00000412472 434 ntBASIC16.01■□□□□ 0.15
PCNAP12004 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PCNAP12004 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
PCNAP12004 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.01■□□□□ 0.15
PCNAP12004 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.01■□□□□ 0.15
PCNAP12004 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.01■□□□□ 0.15
PCNAP12004 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.01■□□□□ 0.15
PCNAP12004 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.01■□□□□ 0.15
PCNAP12004 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.01■□□□□ 0.15
PCNAP12004 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.01■□□□□ 0.15
PCNAP12004 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PCNAP12004 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.01■□□□□ 0.15
PCNAP12004 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
PCNAP12004 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16■□□□□ 0.15
PCNAP12004 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
PCNAP12004 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16■□□□□ 0.15
PCNAP12004 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
PCNAP12004 GPAA1P2-202ENST00000606848 1787 ntBASIC16■□□□□ 0.15
PCNAP12004 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16■□□□□ 0.15
PCNAP12004 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16■□□□□ 0.15
PCNAP12004 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16■□□□□ 0.15
PCNAP12004 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16■□□□□ 0.15
PCNAP12004 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16■□□□□ 0.15
PCNAP12004 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PCNAP12004 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
PCNAP12004 HCG4B-203ENST00000450128 991 ntBASIC16■□□□□ 0.15
PCNAP12004 MTRF1LP2-201ENST00000506027 1122 ntBASIC16■□□□□ 0.15
PCNAP12004 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16■□□□□ 0.15
PCNAP12004 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC16■□□□□ 0.15
PCNAP12004 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 AC010507.1-201ENST00000633895 436 ntBASIC16■□□□□ 0.15
PCNAP12004 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16■□□□□ 0.15
PCNAP12004 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms