Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 AL139400.1-201ENST00000366220 510 ntBASIC17.94■□□□□ 0.46
CLTAP09496 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.94■□□□□ 0.46
CLTAP09496 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.94■□□□□ 0.46
CLTAP09496 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.94■□□□□ 0.46
CLTAP09496 METTL21AP1-201ENST00000438852 635 ntBASIC17.94■□□□□ 0.46
CLTAP09496 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLTAP09496 HLA-J-203ENST00000494367 1087 ntBASIC17.94■□□□□ 0.46
CLTAP09496 AC105233.2-201ENST00000523697 349 ntBASIC17.94■□□□□ 0.46
CLTAP09496 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 AF228730.5-201ENST00000530288 346 ntBASIC17.94■□□□□ 0.46
CLTAP09496 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
CLTAP09496 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.94■□□□□ 0.46
CLTAP09496 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.94■□□□□ 0.46
CLTAP09496 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLTAP09496 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.94■□□□□ 0.46
CLTAP09496 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CLTAP09496 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC17.94■□□□□ 0.46
CLTAP09496 AC073439.1-201ENST00000624121 1774 ntBASIC17.94■□□□□ 0.46
CLTAP09496 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.94■□□□□ 0.46
CLTAP09496 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLTAP09496 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLTAP09496 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.93■□□□□ 0.46
CLTAP09496 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLTAP09496 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.93■□□□□ 0.46
CLTAP09496 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CLTAP09496 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CLTAP09496 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.93■□□□□ 0.46
CLTAP09496 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.93■□□□□ 0.46
CLTAP09496 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.93■□□□□ 0.46
CLTAP09496 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 SLC25A39P2-201ENST00000537614 270 ntBASIC17.93■□□□□ 0.46
CLTAP09496 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.93■□□□□ 0.46
CLTAP09496 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.93■□□□□ 0.46
CLTAP09496 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.93■□□□□ 0.46
CLTAP09496 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.93■□□□□ 0.46
CLTAP09496 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC17.93■□□□□ 0.46
CLTAP09496 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC17.93■□□□□ 0.46
CLTAP09496 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC17.93■□□□□ 0.46
CLTAP09496 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLTAP09496 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CLTAP09496 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC17.93■□□□□ 0.46
CLTAP09496 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLTAP09496 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.93■□□□□ 0.46
CLTAP09496 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CLTAP09496 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 GGT3P-204ENST00000453783 1664 ntBASIC17.93■□□□□ 0.46
CLTAP09496 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLTAP09496 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLTAP09496 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CLTAP09496 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.92■□□□□ 0.46
CLTAP09496 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CLTAP09496 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.92■□□□□ 0.46
CLTAP09496 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.92■□□□□ 0.46
CLTAP09496 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.92■□□□□ 0.46
CLTAP09496 PMS2P2-201ENST00000425039 1128 ntBASIC17.92■□□□□ 0.46
CLTAP09496 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.92■□□□□ 0.46
CLTAP09496 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.92■□□□□ 0.46
CLTAP09496 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CLTAP09496 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.92■□□□□ 0.46
CLTAP09496 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.92■□□□□ 0.46
CLTAP09496 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.92■□□□□ 0.46
CLTAP09496 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.92■□□□□ 0.46
CLTAP09496 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.92■□□□□ 0.46
CLTAP09496 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.92■□□□□ 0.46
CLTAP09496 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CLTAP09496 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms