Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.84■□□□□ 0.29
RHOP08100 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RHOP08100 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.84■□□□□ 0.29
RHOP08100 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RHOP08100 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RHOP08100 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RHOP08100 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
RHOP08100 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RHOP08100 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RHOP08100 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.83■□□□□ 0.28
RHOP08100 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RHOP08100 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHOP08100 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHOP08100 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RHOP08100 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RHOP08100 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RHOP08100 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHOP08100 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHOP08100 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RHOP08100 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RHOP08100 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RHOP08100 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.83■□□□□ 0.28
RHOP08100 AC112492.5-201ENST00000421897 457 ntBASIC16.83■□□□□ 0.28
RHOP08100 HLA-V-201ENST00000429037 534 ntBASIC16.83■□□□□ 0.28
RHOP08100 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RHOP08100 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RHOP08100 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.83■□□□□ 0.28
RHOP08100 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.83■□□□□ 0.28
RHOP08100 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC16.83■□□□□ 0.28
RHOP08100 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.83■□□□□ 0.28
RHOP08100 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.83■□□□□ 0.28
RHOP08100 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.83■□□□□ 0.28
RHOP08100 KRT17P8-201ENST00000540749 863 ntBASIC16.83■□□□□ 0.28
RHOP08100 AC106886.1-201ENST00000568660 600 ntBASIC16.83■□□□□ 0.28
RHOP08100 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.83■□□□□ 0.28
RHOP08100 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RHOP08100 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC16.83■□□□□ 0.28
RHOP08100 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
RHOP08100 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
RHOP08100 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RHOP08100 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 AP001094.4-201ENST00000579008 2176 ntBASIC16.82■□□□□ 0.28
RHOP08100 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.82■□□□□ 0.28
RHOP08100 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.82■□□□□ 0.28
RHOP08100 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
RHOP08100 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
RHOP08100 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC16.82■□□□□ 0.28
RHOP08100 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.82■□□□□ 0.28
RHOP08100 TTTY23B-201ENST00000442790 549 ntBASIC16.82■□□□□ 0.28
RHOP08100 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.82■□□□□ 0.28
RHOP08100 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.82■□□□□ 0.28
RHOP08100 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.82■□□□□ 0.28
RHOP08100 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.82■□□□□ 0.28
RHOP08100 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RHOP08100 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
RHOP08100 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RHOP08100 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
RHOP08100 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
RHOP08100 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.82■□□□□ 0.28
RHOP08100 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RHOP08100 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.81■□□□□ 0.28
RHOP08100 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.81■□□□□ 0.28
RHOP08100 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.81■□□□□ 0.28
RHOP08100 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RHOP08100 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RHOP08100 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.81■□□□□ 0.28
RHOP08100 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.81■□□□□ 0.28
RHOP08100 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RHOP08100 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RHOP08100 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.81■□□□□ 0.28
RHOP08100 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.81■□□□□ 0.28
RHOP08100 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.81■□□□□ 0.28
RHOP08100 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms