Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.52□□□□□ -0.41
TCRAP04437 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRAP04437 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC12.52□□□□□ -0.41
TCRAP04437 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
TCRAP04437 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
TCRAP04437 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
TCRAP04437 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
TCRAP04437 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TCRAP04437 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRAP04437 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRAP04437 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.51□□□□□ -0.41
TCRAP04437 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
TCRAP04437 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.51□□□□□ -0.41
TCRAP04437 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC12.51□□□□□ -0.41
TCRAP04437 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 TSSC2-201ENST00000450217 709 ntBASIC12.51□□□□□ -0.41
TCRAP04437 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.51□□□□□ -0.41
TCRAP04437 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TCRAP04437 AC064862.7-201ENST00000604520 867 ntBASIC12.51□□□□□ -0.41
TCRAP04437 PGM5P2-202ENST00000637225 1043 ntBASIC12.51□□□□□ -0.41
TCRAP04437 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
TCRAP04437 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 MED25-212ENST00000618715 1467 ntTSL 5 BASIC12.51□□□□□ -0.41
TCRAP04437 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.51□□□□□ -0.41
TCRAP04437 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TCRAP04437 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
TCRAP04437 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC12.51□□□□□ -0.41
TCRAP04437 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
TCRAP04437 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.5□□□□□ -0.41
TCRAP04437 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRAP04437 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 SSR4P1-203ENST00000599569 2260 ntBASIC12.5□□□□□ -0.41
TCRAP04437 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRAP04437 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 FXN-203ENST00000396366 922 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRAP04437 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
TCRAP04437 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRAP04437 AC087163.2-201ENST00000457299 853 ntBASIC12.5□□□□□ -0.41
TCRAP04437 BX005266.1-201ENST00000473402 457 ntBASIC12.5□□□□□ -0.41
TCRAP04437 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.5□□□□□ -0.41
TCRAP04437 AC074051.2-201ENST00000565115 352 ntBASIC12.5□□□□□ -0.41
TCRAP04437 AL139424.1-201ENST00000607572 797 ntBASIC12.5□□□□□ -0.41
TCRAP04437 AP001350.2-201ENST00000625104 1094 ntBASIC12.5□□□□□ -0.41
TCRAP04437 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TCRAP04437 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 AL592424.1-201ENST00000563624 1536 ntBASIC12.5□□□□□ -0.41
TCRAP04437 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC12.5□□□□□ -0.41
TCRAP04437 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRAP04437 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TCRAP04437 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.5□□□□□ -0.41
TCRAP04437 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC12.5□□□□□ -0.41
TCRAP04437 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms