Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.85■□□□□ 0.45
VTNP04004 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 AC005034.1-201ENST00000426657 489 ntBASIC17.85■□□□□ 0.45
VTNP04004 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.85■□□□□ 0.45
VTNP04004 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.85■□□□□ 0.45
VTNP04004 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
VTNP04004 MIR4321-201ENST00000592276 80 ntBASIC17.85■□□□□ 0.45
VTNP04004 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 AC012645.4-201ENST00000610691 1061 ntBASIC17.85■□□□□ 0.45
VTNP04004 AL662799.1-202ENST00000614205 422 ntBASIC17.85■□□□□ 0.45
VTNP04004 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.85■□□□□ 0.45
VTNP04004 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC17.85■□□□□ 0.45
VTNP04004 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VTNP04004 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
VTNP04004 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
VTNP04004 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
VTNP04004 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 AL136982.4-201ENST00000437689 1740 ntBASIC17.84■□□□□ 0.45
VTNP04004 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 AC079328.2-201ENST00000561241 3354 ntBASIC17.84■□□□□ 0.45
VTNP04004 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.84■□□□□ 0.45
VTNP04004 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.84■□□□□ 0.45
VTNP04004 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 SPDYE17-201ENST00000412399 783 ntBASIC17.84■□□□□ 0.45
VTNP04004 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.84■□□□□ 0.45
VTNP04004 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.84■□□□□ 0.45
VTNP04004 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.84■□□□□ 0.45
VTNP04004 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.84■□□□□ 0.45
VTNP04004 GNAQP1-201ENST00000444815 1067 ntBASIC17.84■□□□□ 0.45
VTNP04004 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC17.84■□□□□ 0.45
VTNP04004 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.84■□□□□ 0.45
VTNP04004 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.84■□□□□ 0.45
VTNP04004 AC005225.4-201ENST00000557330 545 ntBASIC17.84■□□□□ 0.45
VTNP04004 AC104794.3-201ENST00000566840 1248 ntBASIC17.84■□□□□ 0.45
VTNP04004 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.84■□□□□ 0.45
VTNP04004 SPDYE22P-201ENST00000582158 798 ntBASIC17.84■□□□□ 0.45
VTNP04004 AL035252.4-201ENST00000624174 288 ntBASIC17.84■□□□□ 0.45
VTNP04004 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
VTNP04004 OR6D1P-203ENST00000641209 4860 ntBASIC17.84■□□□□ 0.45
VTNP04004 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.84■□□□□ 0.45
VTNP04004 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
VTNP04004 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.84■□□□□ 0.45
VTNP04004 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.84■□□□□ 0.45
VTNP04004 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
VTNP04004 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.83■□□□□ 0.45
VTNP04004 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
VTNP04004 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VTNP04004 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VTNP04004 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.83■□□□□ 0.45
VTNP04004 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VTNP04004 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VTNP04004 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VTNP04004 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
VTNP04004 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
VTNP04004 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VTNP04004 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VTNP04004 EDF1-203ENST00000371649 790 ntTSL 2 BASIC17.83■□□□□ 0.44
VTNP04004 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
VTNP04004 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.83■□□□□ 0.44
VTNP04004 SPDYE18-201ENST00000510091 1050 ntBASIC17.83■□□□□ 0.44
VTNP04004 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.83■□□□□ 0.44
VTNP04004 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.83■□□□□ 0.44
VTNP04004 AL365330.1-201ENST00000607459 531 ntBASIC17.83■□□□□ 0.44
VTNP04004 AC004790.1-201ENST00000612686 536 ntBASIC17.83■□□□□ 0.44
VTNP04004 AL033527.5-202ENST00000641632 1098 ntBASIC17.83■□□□□ 0.44
VTNP04004 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
VTNP04004 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
VTNP04004 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
VTNP04004 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.83■□□□□ 0.44
VTNP04004 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms