Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 AL590787.1-201ENST00000568856 1315 ntBASIC15.52■□□□□ 0.08
MT-ND1P03886 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
MT-ND1P03886 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND1P03886 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
MT-ND1P03886 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.52■□□□□ 0.08
MT-ND1P03886 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.52■□□□□ 0.08
MT-ND1P03886 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND1P03886 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND1P03886 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.52■□□□□ 0.08
MT-ND1P03886 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.52■□□□□ 0.08
MT-ND1P03886 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 AL591684.3-201ENST00000605187 298 ntBASIC15.52■□□□□ 0.08
MT-ND1P03886 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
MT-ND1P03886 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND1P03886 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.07
MT-ND1P03886 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.52■□□□□ 0.07
MT-ND1P03886 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.52■□□□□ 0.07
MT-ND1P03886 PCGF3-213ENST00000620529 1899 ntBASIC15.52■□□□□ 0.07
MT-ND1P03886 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND1P03886 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND1P03886 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND1P03886 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
MT-ND1P03886 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-ND1P03886 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.51■□□□□ 0.07
MT-ND1P03886 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
MT-ND1P03886 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
MT-ND1P03886 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-ND1P03886 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MT-ND1P03886 MED16-201ENST00000269814 1199 ntTSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
MT-ND1P03886 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-ND1P03886 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC15.51■□□□□ 0.07
MT-ND1P03886 KRT16P4-201ENST00000453883 522 ntBASIC15.51■□□□□ 0.07
MT-ND1P03886 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.51■□□□□ 0.07
MT-ND1P03886 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 AC010331.1-201ENST00000611423 582 ntBASIC15.51■□□□□ 0.07
MT-ND1P03886 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MT-ND1P03886 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-ND1P03886 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
MT-ND1P03886 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.51■□□□□ 0.07
MT-ND1P03886 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 AC067930.6-201ENST00000623257 4947 ntBASIC15.51■□□□□ 0.07
MT-ND1P03886 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MT-ND1P03886 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MT-ND1P03886 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 TOP3BP1-201ENST00000420768 1380 ntBASIC15.5■□□□□ 0.07
MT-ND1P03886 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.5■□□□□ 0.07
MT-ND1P03886 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC15.5■□□□□ 0.07
MT-ND1P03886 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MT-ND1P03886 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms